(Circulation. 1999;100:1722-1726.)
© 1999 American Heart Association, Inc.
Clinical Investigation and Reports |
From the Divisions of Preventive Medicine (P.R., C.H.H.), Cardiovascular Diseases (S.R., P.R., K.L.), and the Channing Laboratory (M.J.S.), Department of Medicine, Brigham and Women's Hospital; the Department of Cardiology, Children's Hospital (K.L.); the Department of Ambulatory Care and Prevention, Harvard Medical School (C.H.H.); and the Departments of Epidemiology (M.J.S., C.H.H.) and Nutrition (M.J.S.), Harvard School of Public Health, Boston, Mass; the Department of Experimental Medicine and Pathology, La Sapienza University (S.R., M.V.), Rome, and Istituto Neurologico Mediterraneo Neuromed (S.R., M.V.), Pozzilli, Italy; and the Max Delbrück Centre for Molecular Medicine (K.L.), Berlin, Germany.
Correspondence to Klaus Lindpaintner, MD, Cardiovascular Division, Department of Medicine, Brigham and Women's Hospital, 75 Francis Street, Boston, MA 02115. E-mail kl{at}calvin.bwh.harvard.edu
| Abstract |
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Methods and ResultsWe investigated 2 previously known markers at ANP, G1837A and T2238C, for their possible association with the occurrence of stroke. This was the largest matched case-controlled sample studied thus far; the sample was drawn from a large prospective study (the Physician's Health Study). When assuming a dominant mode of inheritance, a statistically significant positive association was observed for the 1837A allele, indicating an odds ratio of 1.64 (95% confidence interval, 1.01 to 2.65) for stroke. This observation led to the discovery of a new molecular variant in exon 1, G664A, which was responsible for a valine-to-methionine substitution in the proANP peptide. This mutation, which was in linkage disequilibrium with the G1837A marker, was associated with the occurrence of stroke (odds ratio, 2.0; 95% confidence interval, 1.17 to 3.19; P=0.01).
ConclusionsOur findings suggest that molecular variants of the ANP gene may represent an independent risk factor for cerebrovascular accidents in humans. The strong parallelism to the experimental data obtained in the stroke-prone animal model provides assurance for the relevance of our observation.
Key Words: cerebrovascular disorders genetics natriuretic peptides
| Introduction |
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Understanding the genetic factors that contribute to stroke will advance efforts to develop specific prognostic, preventive, and therapeutic strategies to combat this disease. The late onset of stroke, the common presence of other risk factors (such as those enumerated above), and the probably modest contribution of individual gene variants to a disorder considered a complex, polygenic, and etiologically heterogenous trait present major impediments in the recognition of disease-relevant genes in human populations. Animal models of inherited forms of stroke have thus been used as a reductionist approach to the problem.11 Recently, we reported the identification of 3 chromosomal regions carrying stroke-relevant genes in the stroke-prone, spontaneously hypertensive rat, a model that resembles some forms of human stroke.12 One of them, on rat chromosome 5, colocalized with the gene encoding atrial natriuretic peptide (ANP). On the basis of the well-recognized vascular properties of this peptide,13 which is also well-represented in the cerebral areas involved in cardiovascular regulation, we proposed it as a possible candidate disease gene. Indeed, further work in this animal strain disclosed point mutations affecting both regulatory and coding regions of ANP that resulted in a structurally and functionally different protein and in gene expression in the brain that differs from the stroke-resistant spontaneously hypertensive rat (S. Rubattu, MD, et al, unpublished data, 1999). Prompted by these findings, we investigated the possible association of genetic variants of ANP with the occurrence of stroke in humans by using a prospectively collected, matched, case-controlled sample.
| Methods |
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Determination of the HpaII and ScaI
ANP Genotypes
DNA was extracted from peripheral whole blood
according to standard protocols.15 16 For the
characterization of the ANP genotype, we used 2 previously
described markers, G1837A and T2238C.
G1837A is located in the second intron of the gene at
position 1837 of the published sequence17 ; at this
point, either a guanine or an adenine base is encountered, which
results in the presence or absence, respectively, of a recognition site
for the restriction endonuclease HpaII.
T2238C is located within the third exon at position 2238,
where the presence of a variant C instead of the wild-type T changes
the tga stop-codon of the ANP open reading frame
to a cga, resulting in a peptide that has 2 supernumerary
arginine residues at its carboxy terminal; this change also
inactivates a wild-type recognition site for the
restriction endonuclease ScaI. For the G1837A
marker, we amplified a 446 bp product from genomic DNA that
contained either 4 (1837G) or 3 (1837A) restriction sites for
HpaII, respectively, using 2 flanking
oligonucleotides (ANP-S1:
5'-gggaggccaagggtggatcac-3' and ANP-AS1: 5'-ccccaccccagcctg
atgaccctctg-3'). For the T2238C marker, we followed a
previously reported procedure.18 All polymerase chain
reactions (PCR) were performed as previously described.19
Digestion with the corresponding enzyme was carried out as recommended
by the manufacturer (NEB); the PCR products were loaded onto 3.5%
and 2% submarine agarose gels for the G1837A and
T2238C markers, respectively, and then visualized by
ethidium bromide staining.
Single-Strand Conformational Polymorphism
Analysis of ANP
In 10 samples from stroke cases and 10 samples from controls,
genomic DNA was amplified by using 5 different primer pairs. Amplicons
thus generated were representative of the entire coding
region (3 exons) and of 569 bp of the 5' end. Single-strand
conformational polymorphism was performed using different
electrophoresis conditions, and it revealed a bandshift when 4.5%
polyacrylamide gels were run at room temperature and low
voltage. Subsequently, repetitive sequencing of case and control
samples using fluorescent-labeled dideoxy terminators on an
ABI377 apparatus (Perkin Elmer) was performed for
the relevant PCR segment generated using the
oligonucleotide primers S613
(5'-tggcattccagctcctaggt-3') and AS684
(5'-gatttcaaggtagggccagg-3'). PCR conditions were as mentioned
above.
Statistical Analysis
Allele and genotype frequencies among cases and
controls were counted and compared with values predicted by
Hardy-Weinberg equilibrium using the
2 test.
Odds ratios (ORs) were calculated as a measure of the association of
genotype with stroke phenotype under assumptions of
additive (assigning scores of 0, 1, and 2 for homozygous 1837GG,
2238TT, or 664GG; heterozygous 1837GA,
2238TC, or 664GA; and homozygous 1837AA,
2238CC, or 664AA, respectively), dominant (score of 0
for 1837GG, 2238TT, or 664GG and 1 for
1837GA and 1837AA, 2238TC and
2238CC, or 664GA and 664AA combined,
respectively), and recessive (score of 0 for 1837GG and
1837GA or 2238TT and 2238TC combined,
and of 1 for 1837AA or 2238CC, respectively)
effects of either allele. A recessive model of the G664A
marker was not tested due to the low prevalence of the allele.
Because of the potential confounding effects of aspirin and beta
carotene treatments, all analyses were adjusted for these
variables. For each OR, we calculated 2-tailed probability values
and 95% confidence intervals (CI). We performed both matched-pair and
unmatched analyses, with adjustment for possible confounding
factors (body mass index, systolic and diastolic
blood pressures, smoking, history of hypertension, history of diabetes,
and history of hypercholesterolemia) by
conditional and unconditional logistic regression,
respectively.20 To examine a "low-risk" group, we
excluded all individuals with a history of hypertension and/or diabetes
mellitus and conducted the same analyses.
The magnitude of linkage disequilibrium between markers was evaluated using the program EH (Estimating Haplotype-Frequencies).21 P<0.05 was considered statistically significant.
| Results |
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The genotype frequencies for both markers are reported in
Tables 2
and 3
. They agreed with those
predicted by the Hardy-Weinberg equilibrium. The 1837A
allele was overrepresented among cases compared with
matched controls. The relative risk conferred by this mutant
allele, adjusted for the effect of aspirin and beta carotene, was
1.64 in the matched-pair analysis (95% CI, 1.01 to 2.65;
P=0.046), assuming a dominant mode of inheritance
(1837GG versus 1837GA and 1837AA).
Similar point estimates of relative risk were obtained when an additive
mode of inheritance was assumed and when the low-risk subgroup (n=206)
or cases with ischemic stroke only (n=281) and their matched
controls were examined separately (data not shown). The unmatched
analysis confirmed these results. Multistep logistic regression
analyses identified systolic blood pressure (OR=1.02;
95% CI, 1.01 to 1.04; P=0.004), history of hypertension
(OR=2.2; 95% CI, 1.45 to 3.39; P=0.0002), and history of
diabetes (OR=2.94; 95% CI, 1.35 to 6.38; P=0.0065) as
additional independent predictors of stroke. Adjustment for all these
variables revealed an independent OR for the 1837A allele of
1.49 in the dominant model (95% CI, 0.96 to 2.31; P=0.07)
and of 1.54 in the additive model (95% CI, 1.02 to 2.32;
P=0.038). Finally, testing a recessive model did not show
any significant result in either group.
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Analogous analyses carried out for the ANP T2238C
marker failed to show any significant association between
genotype and case-control status (Table 3
). As expected,
the G1837A marker showed a weak but significant degree of
linkage disequilibrium with the T2238C marker
(
21df=6.8;
P=0.01).
Coding Sequence Polymorphism and Stroke
Because the G1837A marker is devoid of any demonstrated
functional relevance, we performed single-strand conformation
polymorphism screening on DNA samples from 10 cases and 10
controls; with one of the primer pairs used, we recognized a band shift
in 7 cases but no controls. Sequence analysis revealed a G
A
transition at position 664 in exon 1 (G664A) compared with
the published sequence (Figure
). As a
consequence, a valine-to-methionine substitution at amino acid position
7 of the proANP peptide was predicted. No other mutation was found in
the remaining sequence of the gene.
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The genotype frequencies for the coding mutation are reported
in Table 4
. They agreed with those
predicted by the Hardy-Weinberg equilibrium.
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When this genetic variant (G664A) was used as a
marker to perform association analyses for stroke, a
statistically significant OR of 2.0 (95% CI, 1.17 to 3.39;
P=0.01) was found when a dominant mode of inheritance was
assumed. Analyses assuming different modes of inheritance and
subgroups were performed as before for the G1837A marker;
they again yielded materially similar results (Table 5
). Adjustment for the other independent
predictors for stroke by multivariate analysis
revealed an OR for the 664A carrier status of 2.09 in the
dominant model (95% CI, 1.18 to 3.72; P=0.01) and of 2.03
in the additive model (95% CI, 1.20 to 3.44; P=0.008).
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The G1837A and G664A polymorphisms displayed
a highly significant degree of linkage disequilibrium
(
21df=299.6;
P<10-5), as expected. However,
the G664A polymorphism showed a weaker degree of linkage
disequilibrium with T2238C
(
21df=6.9;
P=0.01).
| Discussion |
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ANP exerts powerful natriuretic, diuretic, and vasodilatory effects, and it is well represented in the cerebral areas involved in cardiovascular regulation. Thus, it is reasonable to consider it a logical candidate gene for vascular, including cerebrovascular, disease, particularly in light of previous evidence of significant elevations of circulating ANP levels in stroke patients.22 The biology of ANP has been studied extensively in cardiac atria and ventricles, where upregulation of ANP expression is considered a hallmark of ventricular hypertrophy. Much less is known about its expression and regulation in other tissues, such as the brain (where it is primarily expressed in the hypothalamus, anterior pituitary and, notably, the AV3V region that plays an important role in cardiovascular regulation) or vascular smooth muscle cells. Although extracardiac expression of ANP contributes only a rather small fraction to overall ANP synthesis, local concentrations in the brain and the cerebral vasculature can reach physiologically relevant levels.23
The G1837A polymorphism, for which we initially found a statistically significant association with the incidence of stroke, is located within an intron; it was, therefore, judged unlikely to represent a biologically/functionally relevant mutation. In contrast, the subsequently detected G664A variation, which shows a somewhat higher OR of being associated with the phenotype, is consistent with a functionally relevant structural change in the molecule. The possible functional importance of the residue at position 7 of the prosegment of ANP may be gleaned from the fact that this amino acid is conserved in different species24 and that it belongs to the N-terminal region of the proANP peptide that, as cardiodilatin, has well-characterized biological activity of its own.25 26
In contrast, the T2238C mutation, which also changes the coding sequence of ANP (resulting in the addition of 2 extra arginine residues to the translation product) was not significantly associated with stroke. In rats, mice, cattle, and rabbits, the published sequence contains an arginine-arginine dibasic residue at the carboxy terminal that may undergo cleavage during the same processing step that results in the cleavage of the prohormone to the actual, biologically active 28 amino acid peptide at a monobasic arginine-serine residue site. Therefore, it is possible that the 2 additional arginine residues at the carboxy terminal are no longer present in the mature peptide.
Because of the immediate vicinity of the genes encoding brain natriuretic peptide (BNP) and ANP on the chromosome, our findings could potentially also imply a role for BNP. We found no differences in structure or expression of BNP among stroke-prone and stroke-resistant rat strains (unpublished observations). A polymorphic marker for BNP that we typed in the study sample failed to yield sufficient information to provide additional insights (data not shown).
The full understanding of our present findings, particularly the possible functional consequences of the G664A variant and its potential application to prognosis, prevention, or therapy for stroke, await further studies. However our observations, if confirmed by replication, do provide a new molecular marker for the risk of stroke in humans. The size and prospective character of the present study and the strong parallelism to experimental data support the relevance of our observations.
| Acknowledgments |
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Received April 13, 1999; revision received June 14, 1999; accepted June 28, 1999.
| References |
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